The IGS Standard Operating Procedure for Automated Prokaryotic Annotation
نویسندگان
چکیده
منابع مشابه
The IGS Standard Operating Procedure for Automated Prokaryotic Annotation
The Institute for Genome Sciences (IGS) has developed a prokaryotic annotation pipeline that is used for coding gene/RNA prediction and functional annotation of Bacteria and Archaea. The fully automated pipeline accepts one or many genomic sequences as input and produces output in a variety of standard formats. Functional annotation is primarily based on similarity searches and motif finding co...
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The DOE-JGI Metagenome Annotation Pipeline (MAP v.4) performs structural and functional annotation for metagenomic sequences that are submitted to the Integrated Microbial Genomes with Microbiomes (IMG/M) system for comparative analysis. The pipeline runs on nucleotide sequences provided via the IMG submission site. Users must first define their analysis projects in GOLD and then submit the ass...
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ژورنال
عنوان ژورنال: Standards in Genomic Sciences
سال: 2011
ISSN: 1944-3277
DOI: 10.4056/sigs.1223234